Wrapper function for gunzip, bunzip — decompress • CLIPflexR

Wrapper function for gunzip, bunzip

decompress(
  fileToDecompress,
  outDir = file_path_sans_ext(fileToDecompress),
  keep = TRUE,
  overwrite = FALSE
)

Arguments

fileToDecompress: path to file to decompress.
outDir: output directory.
keep: keep (don't delete) input files, TRUE (default) or FALSE.
overwrite: overwrite existing output files, TRUE or FALSE (default).

Value

path to unzipped file.

Author

Kathryn Rozen-Gagnon

Examples

 
testFQ <- system.file("extdata/Fox3_Std_small.fq.gz",package="CLIPflexR")
decompress(testFQ,overwrite=TRUE)
#> [1] "/Users/runner/work/_temp/Library/CLIPflexR/extdata/Fox3_Std_small.fq"