Wrapper function for gzip, bzip — compress • CLIPflexR

Wrapper function for gzip, bzip

compress(
  fileToCompress,
  keep = TRUE,
  methodCompress = "gzip",
  overwrite = FALSE
)

Arguments

fileToCompress: path to file to compress.
keep: keep (don't delete) input files, TRUE (default) or FALSE.
methodCompress: method to use for compression.
overwrite: overwrite existing output files, TRUE or FALSE (default).

Value

path to zipped file.

Author

Kathryn Rozen-Gagnon

Examples

 
testFQ <- system.file("extdata/Fox3_Std_small.fq.gz",package="CLIPflexR")
decom <- decompress(testFQ,overwrite=TRUE)
com <- compress(decom,overwrite=TRUE)